scEpiTools

Run analysis with scEpiEnsemble

H5ad file* :

Specify input file type* :

Specify parameters for ensembling

Use EpiScanpy* :

Use Signac* :

Use SnapATAC* :

Ensemble method* :

Specify parameters in preprocessing step

Cell type key* :

TF-IDF* :

Binarization* :

Normalization* :

Minimum peaks* :

Minimum cells* :

Specify parameters in dimension reduction step

Number of PCs* :

Number of neighbors* :

Method for connectivity* :

Distance metric* :

Perplexity* :

Minimum distance* :

Reference genome* :

Specify parameters in clustering and visualization step

Clustering algorithm* :

Visualization method* :

Number of clusters* :

Cluster resolution* :

Random seed* :

Email address: