scEpiTools

Run analysis with SnapATAC

Snap file*:

Barcode file*:

Specify parameters in preprocessing step

Minimum UMI* :

Maximum UMI* :

Minimum promoter ratio* :

Maximum promoter ratio* :

Bin size* :

Reference genome* :

Specify parameters in dimension reduction and clustering step

Number of eigenvectors* :

Select dimensions* :

Number of neighbors* :

Clustering algorithm* :

Visualization method* :

Marker genes :

Specify parameters in differential feature and GREAT step

Cluster number for DE* :

Cluster number for GREAT* :

Email address: